Update of aims population data and test with the genogeographer admixture module

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Standard

Update of aims population data and test with the genogeographer admixture module. / Mogensen, H. S.; Tvedebrink, T.; Pereira, V.; Eriksen, P. S.; Morling, N.

I: Forensic Science International: Genetics Supplement Series, Bind 8, 2022, s. 15-16.

Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › fagfællebedømt

Harvard

Mogensen, HS, Tvedebrink, T, Pereira, V, Eriksen, PS & Morling, N 2022, 'Update of aims population data and test with the genogeographer admixture module', Forensic Science International: Genetics Supplement Series, bind 8, s. 15-16. https://doi.org/10.1016/j.fsigss.2022.09.006

APA

Mogensen, H. S., Tvedebrink, T., Pereira, V., Eriksen, P. S., & Morling, N. (2022). Update of aims population data and test with the genogeographer admixture module. Forensic Science International: Genetics Supplement Series, 8, 15-16. https://doi.org/10.1016/j.fsigss.2022.09.006

Vancouver

Mogensen HS, Tvedebrink T, Pereira V, Eriksen PS, Morling N. Update of aims population data and test with the genogeographer admixture module. Forensic Science International: Genetics Supplement Series. 2022;8:15-16. https://doi.org/10.1016/j.fsigss.2022.09.006

Author

Mogensen, H. S. ; Tvedebrink, T. ; Pereira, V. ; Eriksen, P. S. ; Morling, N. / Update of aims population data and test with the genogeographer admixture module. I: Forensic Science International: Genetics Supplement Series. 2022 ; Bind 8. s. 15-16.

Bibtex

@article{2b6abd0a83174cf7b9439173e50418f4,
title = "Update of aims population data and test with the genogeographer admixture module",
abstract = "Individuals from Slovenia, Greece, Albania, and Eritrea were typed with the Precision ID Ancestry Panel and included among GenoGeographer's nine reference populations (Sub-Saharan Africa, Horn of Africa, North Africa, Middle East, Europe, South/Central Asia, East Asia, and East and West Greenland). We tested the performance of GenoGeographer with the Admixture Module on AIM profiles of 3548 individuals assumed to belong to one of the reference populations. A total of 3387 (95.5 %) profiles were assigned to one or more of the reference populations, either a single population or an admixture of two or more populations, while 161 (4.5 %) profiles were not assigned to any reference population or admixtures thereof. For 1486 AIM profiles with no reference population of origin in GenoGeographer, the rejection rate was more than 70 % for AIM profiles from North and South America and less than 20 % for those from Central, North, and Northeast Asia.",
keywords = "Admixture module, Ancestry informative markers, GenoGeographer, Population assignment",
author = "Mogensen, {H. S.} and T. Tvedebrink and V. Pereira and Eriksen, {P. S.} and N. Morling",
note = "Publisher Copyright: {\textcopyright} 2022 Elsevier B.V.",
year = "2022",
doi = "10.1016/j.fsigss.2022.09.006",
language = "English",
volume = "8",
pages = "15--16",
journal = "Forensic Science International: Genetics. Supplement Series",
issn = "1875-1768",
publisher = "Elsevier Ireland Ltd",

}

RIS

TY - JOUR

T1 - Update of aims population data and test with the genogeographer admixture module

AU - Mogensen, H. S.

AU - Tvedebrink, T.

AU - Pereira, V.

AU - Eriksen, P. S.

AU - Morling, N.

N1 - Publisher Copyright: © 2022 Elsevier B.V.

PY - 2022

Y1 - 2022

N2 - Individuals from Slovenia, Greece, Albania, and Eritrea were typed with the Precision ID Ancestry Panel and included among GenoGeographer's nine reference populations (Sub-Saharan Africa, Horn of Africa, North Africa, Middle East, Europe, South/Central Asia, East Asia, and East and West Greenland). We tested the performance of GenoGeographer with the Admixture Module on AIM profiles of 3548 individuals assumed to belong to one of the reference populations. A total of 3387 (95.5 %) profiles were assigned to one or more of the reference populations, either a single population or an admixture of two or more populations, while 161 (4.5 %) profiles were not assigned to any reference population or admixtures thereof. For 1486 AIM profiles with no reference population of origin in GenoGeographer, the rejection rate was more than 70 % for AIM profiles from North and South America and less than 20 % for those from Central, North, and Northeast Asia.

AB - Individuals from Slovenia, Greece, Albania, and Eritrea were typed with the Precision ID Ancestry Panel and included among GenoGeographer's nine reference populations (Sub-Saharan Africa, Horn of Africa, North Africa, Middle East, Europe, South/Central Asia, East Asia, and East and West Greenland). We tested the performance of GenoGeographer with the Admixture Module on AIM profiles of 3548 individuals assumed to belong to one of the reference populations. A total of 3387 (95.5 %) profiles were assigned to one or more of the reference populations, either a single population or an admixture of two or more populations, while 161 (4.5 %) profiles were not assigned to any reference population or admixtures thereof. For 1486 AIM profiles with no reference population of origin in GenoGeographer, the rejection rate was more than 70 % for AIM profiles from North and South America and less than 20 % for those from Central, North, and Northeast Asia.

KW - Admixture module

KW - Ancestry informative markers

KW - GenoGeographer

KW - Population assignment

U2 - 10.1016/j.fsigss.2022.09.006

DO - 10.1016/j.fsigss.2022.09.006

M3 - Journal article

AN - SCOPUS:85139362316

VL - 8

SP - 15

EP - 16

JO - Forensic Science International: Genetics. Supplement Series

JF - Forensic Science International: Genetics. Supplement Series

SN - 1875-1768

ER -

ID: 322787111